Post-alignment tools involve tasks that can be performed on aligned data.These are typically used in preparing aligned data for other downstream analyses, such as DNA-Seq or RNA-Seq analysis.
To invoke Post-alignment tools, click on an Aligned reads data node (Figure 1). There are three functions available in Post-alignment tools:
- Filter alignments
- Convert alignments to unaligned reads
- Combine alignments
- Deduplicate UMIs
- Downscale alignments
Figure 1. Invoking Post-alignment tools
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Melissa del Rosario
author: cignacio