To install or upgrade to the latest version of Partek® Flow® software, follow the directions outlined in the Installation Guide.
11.0.24.0204
- Added long reads aligner minimap2 and pbmm2
- Simplify dataviewer configuration dialogs
- Added Scree plot and component loadings table in PCA report by default
- Adde Poisson, negative binomial regression options in differential analysis task
- Minor bug fixes
Latest docker image: registry.partek.com/rtw:24.0204.33
11.0.24.0102
- Automatically generate spatial report on analysis tab after spatial data import
- Added alt-splicing task option on Salmon's transcript count data node
- Added STARsolo task for 10x Genomics scRNA-seq data
- Updated FreeBayes to v1.3.6
- PCA task default feature filter method is changed to variance from vst
- Filter peaks task is moved to Filtering section from Peak analysis section on the menu
- Make the enable/disable user account as separate privilege from add user account for admin
- Minor bug fixes
Latest docker image: registry.partek.com/rtw:24.0102.29
11.0.23.1204
- Enabled MACS peak detection report visualizations in the Data viewer
- Improved the algorithm for the normalize to housekeeping genes task
- Added more gene annotation options in SNV task report
- Fixed the Venn diagram issue on some of the browsers
- Minor bug fixes
Latest docker image: registry.partek.com/rtw:23.1204.23
11.0.23.1105
- Added search function in Help menu to directly search the content in documentation page
- Added option to choose a number of features to use in PCA computation
- Minor bug fixes
Latest docker image: registry.partek.com/rtw:23.1105.16
11.0.23.1023
- Improved differential analysis report layout
- Add impute missing value task
- Minor bug fixes
Latest docker image: registry.partek.com/rtw:23.1023.14
11.0.23.1009
- Improved pre-alignment QC report
- Fixed differential analysis report table download issue
- Minor bug fixes
Latest docker image: registry.partek.com/rtw:23.1009.11
11.0.23.0918
- The user interface now boasts a modern appearance
- Enhanced the import wizard for greater intuitiveness and user-friendliness
- Added support for SomaLogic ADAT bulk protein data
- Improved the file browser for fast access to recent server uploads
- Bolstered file protection to prevent accidental deletions when used by other projects
- Added support for the 10x Genomics Xenium platform
- Introduced support for the Nanostring CosMx platform
- Added a new task for Correlation analysis between different assays
- Improved scatterplot selection with a handy painting mode
- Added the ability to display a high resolution Visium image with a new Spatial imaging report task for quick viewing
- Added a manual alignment option for tissue image visualization
- Streamlined the import process for multiple files per sample, e.g. import all 3 sparse matrix (feature-barcode-matrix) files per sample for all samples at one time
- Added more available information on the Annotated region report
- Improved the Seurat object conversion to be more intuitive
- Added a more detailed report to the Adapter trimming task
- Creating pseudobulk data by pooling single cells has been made easier with increased functionality
- Optimized the differential analysis dialogs for improved usability
- Changed the default normalization method for bulk RNA-Seq data to Median ratio (DESeq2)
- Improved the Detect fusions and Trim bases tasks to be more intuitive
- Allowed the Single-cell QA/QC task to be performed on individual samples
- Minor bug fixes
Latest docker image: registry.partek.com/rtw:23.0918.1
Archived Release Notes -- Partek Flow 10
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