Partek Flow Documentation

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Click your avatar in the top right corner of the Partek Flow interface, choose "Settings" in the menu, and select "Lists" from the left panel of the Components section. For more information please click here. We do provide hosted lists (from publications) for different cell types or conditions which can also be used in your analysis and lists can also be generated from result tables. 

What can I use to identify cells that are actively expressing genes within a gene list?

Use AUCell to identify cells with active gene sets. This task calculates a value for each cell by ranking all genes by their expression level in the cell and identifying what proportion of the genes from the gene list fall within the top 5% (default cutoff) of genes.

Can I build and use pipelines for my analysis?

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