Partek Flow Documentation

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  • Added option to allow features to be sorted based on a feature list in heatmap
  • Allow to invoke WNN on SVD data node
  • Minor bug fixes

10.0.22.0228

  • Improved on handling big genome alignment like wheat
  • Added classification summary report on Garnett classify cell type task
  • Allow to sort heatmap samples/cells using numeric attributes
  • Improved the speed on sctransform task
  • Minor bug fixes

10.0.22.0213

  • Added TF_IDF normalization task
  • Added singular value decomposition task
  • Improved the Seurat3 integration computation on normalized with SCTransformed data by adding PrepSCTIntegration function
  • Changed the Seurat object importer, added convert Seurat to matrix task
  • Removed Shrimp aligner support
  • Minor bug fixes

10.0.22.0130

  • Improved Flow homepage layout
  • Improved the pipeline management page
  • Minor bug fixes

10.0.22.0121

  • Added sorting observations based numeric attribute function on heatmap
  • Added gene labeling option in heatmap when use Ensembl annotation
  • Added CellRanger ATAC wrapper
  • Improved filter observation tasks to easily choose multiple subgroups from the same attribute
  • Improved feature list creation after features selected on data viewer
  • Minor bug fixes

10.0.22.0102

  • Added GSEA task for biological interpretation
  • Extend Cell ranger task to support custom assemblies
  • Improved Space ranger interface to be more intuitive
  • Upgraded GATK to version 4.2
  • Removed standardization option in t-SNE dialog
  • Added learning rate parameter in t-SNE advanced dialog
  • Added function to allow to specify multiple levels in each comparison panel in non-parametric ANOVA and Welch's ANOVA task
  • Minor bug fixes



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