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Flow Documentation

Partek Flow Documentation

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SubtitleTextSVD task in Flow
AnchorNamesvd_task

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To run SVD task, 

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SubtitleTextInterface of SVD task in Partek Flow.
AnchorNamesvd_task_gui

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The task report for SVD is similar to PCA. Its output will be used for downstream analysis and visualization, including Harmony (Figure 3).

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SubtitleTextExample workflows to demonstrate downstream analysis and visualization of SVD output for scATAC-seq data.
AnchorNamesvd_task_output

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References

  1. Cusanovich, D., Reddington, J., Garfield, D. et al. The cis-regulatory dynamics of embryonic development at single-cell resolution. Nature 555, 538–542 (2018). https://doi.org/10.1038/nature25981

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