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Partek Flow Documentation

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SubtitleTextInvoking Enrichment analysis
AnchorNameInvoking Enrichment analysis

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  • Select the latest gene set from geneontology.org from the Gene set database drop-down menu
  • Click Finish 

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SubtitleTextEnrichment task node
AnchorNameEnrichment task node

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  •  Double-click the Gene set enrichment task node to open the task report (Figure 3)

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SubtitleTextViewing the GO enrichment task report
AnchorNameGO enrichment task report

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The GO enrichment task report spreadsheet lists GO terms by ascending p-value with the most significant GO term at the top of the list. Also included are the enrichment score, the number of genes from that GO term in the list, and the number of genes from that GO term that are not in the list. 

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SubtitleTextPathway enrichment task node
AnchorNamePathway enrichment

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  • Double-click the Pathway enrichment task node to open the task report

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SubtitleTextPathway enrichment task report
AnchorNamePathway enrichment

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To view an interactive KEGG pathway map, click the pathway ID (Gene set column). 

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