Partek^® Pathway^® provides a visualization tool for pathway enrichment spreadsheets utilizing the KEGG database.

The screenshots shown below may vary across platforms and across different versions of Partek.

This tutorial will illustrate:

Description of the Data Set

This The pathway enrichment analysis illustrated in this user guide uses a pre-analyzed data set in which an ANOVA has been performed on mRNA gene expression datathe miRNA Expression and Integration with Gene Expression data set . This data set is also used in the our miRNA data analysis tutorial. 

Data and associated files can be downloaded directly from the Partek website at Partek Pathway user guide data.

Save the downloaded Download and save the zipped project folder in an accessible location on your computer. The project folder for the tutorial will be created in the same location the zipped project folder is stored. 

Importing

...

the Data Set

Import the project using the zipped project importer in Partek Genomics Suite. 

• Select File from the main toolbar
• Select Import
• Select Zipped Project...
• Choose the zipped project folder, miRNA_tutorial_data

The project will open with three spreadsheets:

1. Affy_miR_BrainHeart_intensities,

2. Affy_HuGeneST_BrainHeart_GeneIntensities,

3. ANOVAResults gene.