Page History
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- Click the filtered Filtered feature list data node
- Click Biological interpretation in the task menu
- Click Gene set enrichment to enrichment then select Gene set database to perform GO enrichment analysis (Figure 1)
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- Select the latest gene set from geneontology.org from the Gene set database drop-down menu
- Click Finish
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- Double-click the Gene set enrichment task node to open the task report (Figure 3)
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The GO enrichment task report spreadsheet lists GO terms by ascending p-value with the most significant GO term at the top of the list. Also included are the enrichment score, the number of genes from that GO term in the list, and the number of genes from that GO term that are not in the list.
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- Click the filtered Filtered feature list data node
- Click Biological interpretation in the task menu
- Click Pathway enrichment Gene set enrichment then select KEGG database
- Click Finish in the configuration dialog to run KEGG analysis with the Homo sapiens KEGG database
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- Double-click the Pathway enrichment task node to open the task report
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To view an interactive KEGG pathway map, click the pathway ID (Gene set column).
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Overview
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