Partek^® Flow^® can Partek Flow can import a wide variety of data types including raw counts, matrices, microarray, variant call files as well as unaligned and aligned NGS data.

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• Adapter sequences
  • "_bbbbbb" followed by "_" or at the end of the file name, where each "b" is "A", "C", "G", or "T"
• Lane numbers
  • "_L###" followed by "_" or at the end of the file name, where each "#" is a digit 0 to 9

• Dates

  • in the form "####-##-##" preceded or followed by a period or underscore

• Set number 

  • of the form "_###" from the end

Navigating the file browser to transfer files to the server

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The file browser is used to transfer files to the server so that these files can be added to a project for analysis. If you are importing a Bioproject from GEO/ENA or using URLs for data import, there is no need to transfer the files to the server.

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Using the file browser to transfer files to the server: 

• Click Transfer files Image Added to access the file browser
• Drag and drop or click My Device Image Modified to add files from your machine
• Click Browse Image Added to modify the Upload directory or create a new folder. The Upload directory   should be specified, known, and distinguishable for project file management. You will return to this directory and access the files to import them into a project
• To continue to add more files use + Add more  in the top right corner. To cancel this the process select Cancel in the top left corner
• Click Upload Image Modified to complete the file upload
• Do not exit the browser tab or let the computer go to sleep or shut down until the transfer has completed 

File size displayed in the table is binary format, not decimal format (e. E.g. GB displayed in the table is gigibyte not gigabyte. 1 gigibyte is 1,073,741,824 bytes. 1 gigabyte is 1,000,000,000 bytes. 1 gigibyte is 1.074 gigabytes).

Associate fastq files for multi-omic data 

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