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Click the green plus (on the library file management page. Alternatively, click the Add library file button, choose Aligner index from the Library type drop-down list and whole genome from the Index to drop-down list. If an aligner index is already associated with an assembly, it will not appear in the Aligner drop-down list. If all but one of the possible aligner indexes have been added, the remaining aligner index will be the only option and will not appear in a drop-down list (Figure 1).
) icon next to Reference aligner indexes section header ...
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