Partek Flow Documentation

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This will invoke the dialog (Figure 2), select the calculation will be performed on samples (or cells on single cell count data node) or features

Numbered figure captions
SubtitleTextSelect to calculate descriptive statistics on samples or cells
AnchorNameobs

A second data node of a different type than the first selected data node is chosen automatically. The second data node can selected manually using the Select data node button. 

  • Click Select data node to choose the second data node you want to merge (Figure 1)

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SubtitleTextOpening the data node selector
AnchorNamePicking a second node
  • Double-click the second data node to select it (Figure 2)
Numbered figure captions
SubtitleTextChoosing the second matrix
AnchorNamePicking the second node

Image Removed

  • Click Finish to run

Merged counts data node is produced (Figure 3). 


Numbered figure captions
SubtitleTextMerged counts output
AnchorNameMerged counts output

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The intersection of observations (cells and/or samples) from the two input matrices is included in the merged matrix. 

Once two data types have been merged, they can be split using Split matrix.

For a practical example using Merge matrices, please see our tutorial on Analyzing CITE-Seq DataThe available statistics are listed on the left panel, suppose "x1, x2, ..., xn"represent an array of numbers

  • Coefficient of variation (CV): Image Added s represent the standard deviation

  • Geometric mean: g=Image Added

  • Max: Image Added

  • Mean: Image Added


  • Median: when n is odd, median is Image Added, when n is even, median is Image Added

  • Median absolute deviation: Image Added, where Image Added

  • Min: Image Added

  • Non zero count: number of observations that is not zero
  • Q1: 25th percentile
  • Q3: 75th percentile
  • Range: xmax - x min

  • Standard deviation: Image Added where Image Added

  • Sum: Image Added

  • Variance: Image Added




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