Join us for a webinar: The complexities of spatial multiomics unraveled
May 2

PGS Documentation

Page tree
Skip to end of metadata
Go to start of metadata

You are viewing an old version of this page. View the current version.

Compare with Current View Page History

« Previous Version 5 Next »

To install or upgrade to the latest version of Partek® Genomics Suite™ software, follow the directions outlined in the Installation Guide.

PGS7.17.1018

General Improvement:

  • Partek spreadsheet can only be saved as binary format
  • Partek spreadsheet can be exported as text format
  • Import text file will not change the input text file, the imported file will be saved as user defined name in binary format
  • When there are unsaved spreadsheets, save project will give warning message to save each unsaved spreadsheet
  • When clone a spreadsheet, the newly generated spreadsheet name is unique by default
  • Re-ordered the File menu to improve the readability
  • Add a function to impute missing value with random number from a defined distribution
  • Improved the save image dialog on Mac and Linux
  • When open violin plot, display the properties tab by default 
  • When import Affymetrix .cel files on gene expression arrays, the output spreadsheet from File>Import menu is the same as that of gene expression workflow .cel file import

Bug fixes:

  • Fixed a bug on split column dialog on Mac platform
  • Fixed a bug on Affymetrix .arr file import
  • Other minor bug fixes

PGS7.17.0918

General Improvement:

  • Most of the computations are multi-threaded, which drastically increases the speed
  • Viewers generated from spreadsheets are new tabs within the same window frame by default; viewer windows can be docked back to the main window frame
  • Workflow panel is visible in any invoked viewers, order of the workflow steps is more intuitive
  • Updated with modern icons and graphics color palette
  • Mixed model ANOVA uses REML by default
  • Sample ID factor is not included in the model of Alt-splicing ANOVA, GO ANOVA, pathway ANOVA
  • Apply button are removed from most of the dialogs
  • Improved interface is cleaner and more user friendly
  • New functional normalization method in the Illumina methylation array importer (450K and 850K)
  • Improved SWAN normalization in the Illumina methylation array importer
  • Allows import of different versions of the Illumina methylation arrays when using the same set of library files
  • Improved text file importer by adding wizard for specifying the properties of the spreadsheet
  • Removed repeated measures menu option, it is recommended to use ANOVA doing repeated measures analysis
  • Simplified menus and dialogs, removed obsolete functions, improved wording
  • Automatically downloads annotation files, even from sites with HTTPS or redirects (e.g. Affymetrix and GEO)
  • Logged data is detected and appropriate defaults are automatically set

 

Older release notes are available on our website at Partek® Genomics Suite™ Software Update Archive.

 

  • No labels