Flow Documentation

Partek Flow Documentation

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Old Version 18

changes.mady.by.user Alex Rutkovsky

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New Version 19

changes.mady.by.user Matteo Luberti

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Numbered figure captions
SubtitleTextFiltering low quality cells based on protein expression data
AnchorNamePreviewing a filter using the Single cell QA/QC violin plots

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  • Click Filter include iconunder Filter on the right
  • Click Apply observation filter...
  • Select the Antibody Capture data node as input in the pipeline preview (Figure 5)
  • Click Select

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Numbered figure captions
SubtitleText After the Apply filter button is selected, you will be presented with a preview of your pipeline. You need to select the appropriate data node to apply the filtering to. In this case, the Antibody capture node
AnchorNameSelect antibody capture data node as input for filtering task

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You will see a message telling you a new task has been enqueued.

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Numbered figure captions
SubtitleTextFiltering low quality cells based on gene expression data
AnchorNamePreviewing a filter using the Single cell QA/QC violin plots

Image Modified

  • Click Filter include iconunder Filter on the right
  • Click Apply observations filter
  • Select the Gene Expression data node as input in the pipeline preview
  • Click Select
  • Click OK to dismiss the message about the task being enqueued
  • Click the project name at the top to go back to the Analyses tab
  • Your browser may warn you that any unsaved changes to the data viewer session will be lost. Ignore this message and proceed to the Analyses tab

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