Partek Flow Documentation

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Importing matrices into Partek Flow (this Market Exchange Format is popular for public repositories) 

To import the matrices into Partek Flow, create a new project and click Import  > Import scRNA count feature-barcode-mtx.

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Numbered figure captions
SubtitleTextImport three feature-barcode matrix files for each sample
AnchorNameImport_single_cell_data feature-barcode-matrix


You must first transfer the files to the server. Use the Image AddedTransfer files button on the Partek® Flow® homepage or use the Image Addedtransfer files link to upload data to the server. Navigate to the folder containing your filtered matrices. By default, the Cell Ranger pipeline output will have a folder called filtered_gene_bc_matrices. It is helpful to rename and organize the files prior to transfer. 

Drag and drop or click my device to browse files from the device.

Click browse to modify the upload directory. The Image Addedupload directory should be specified, known, and distinguishable for project file management. You will return to this directory and access the files to import them into a project.



Numbered figure captions
SubtitleTextFiltered matrix folder from Cell Ranger pipeline
AnchorNamefiltered_gene_bc_matrices

 

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