Partek^® Flow^® can import a wide variety of data types including raw counts, matrices, microarray, variant call files  files as well as unaligned and aligned NGS data.

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The following file types are valid and will be recognized by the Partek Flow file browser. There is no need to unzip compressed files.:

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In cases where paired end fastq data is present, files will also be automatically recognized and their paired relationship will be maintained throughout the analysis.

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• Adapter sequences
  • "_bbbbbb" followed by "_" or at the end of the file name, where each "b" is "A", "C", "G", or "T"
• Lane numbers
  • "_L###" followed by "_" or at the end of the file name, where each "#" is a digit 0 to 9

• Dates

  • in the form "####-##-##" preceded or followed by a period or underscore

• Set number 

  • of the form "_###" from the end

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