Partek Flow Documentation

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Partek® Flow® can import a wide variety of data types including raw countcounts, matrices, microarray, variant call files  as well as unaligned and aligned NGS data.

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  • idat
  • vcf
  • gz
  • tar
  • bpm
  • fastq
  • txt
  • SAM
  • bgx
  • mtx
  • probe_tab
  • CEL
  • qual
  • zip
  • bcf
  • sra
  • sff
  • fasta
  • BAM
  • h5 matrix

 

In cases where there is paired end fastq data is present, files will also be automatically recognized and their paired relationship will be maintained throughout the analysis.

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