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Logging in to your Partek Flow account will bring up the Home page (Figure 1). This page will show recent activities you've performed, recent projects you've worked on and pertinent details about each project.

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• The first row lists the attribute names (e.g. Treatment, Exposure) and
• The first column of the table lists the sample names (the sample names in the file must be identical to the ones listed in the Sample name column in the Data tab)
• List the corresponding attributes for each sample in the succeeding columns

Basic Flow

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layout

The Analysis Tab

After samples have been added and associated with valid data files, a data node will appear in the Analysis tab (Figure 3) . The Analysis tab is where you can invoke tasks and view the results of your analysis.

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Data and

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task nodes

The Analyses tab contains two elements: data nodes (circles) and task nodes (rounded rectangles) connected by lines and arrows . Collectively, they represent a data analysis pipeline (Figure 4).

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Downloading your

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data

Data associated with any data node can be downloaded by clicking the node and choosing Download data (Figure 8). Compressed files will be downloaded to the local computer where the user is accessing the Partek Flow server. Note that bigger files (such as unaligned reads) would take longer to download. For guidance, a file size estimate is provided for each data node. Downloaded files can be seamlessly imported in Partek^® Genomics Suite^®.

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Partek Flow in action

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See a video of how to set-up a simple RNA-Seq project on our YouTube page: https://youtu.be/tZ4BhhVCJfU

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