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High-quality cells can be selected using the Selection card on the right, which is pre-loaded with three selection rules, one for each quality metric (Figure 5).

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Hovering the mouse over one of the selection rules reveals a histogram showing you the frequency distribution of the respective quality metric. The minimum and maximum thresholds can be adjusted by clicking and dragging the sliders (Figure 6).

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Alternatively, the thresholds can be set by typing directly into the text boxes in each selection rule (Figure 7).

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Adjusting the selection criteria will select and deselect cells in all three plots simultaneously. Depending on your settings, the deselected points will either be dimmed or gray. The filters are additive. Combining multiple filters will include the intersection of the three filters. The number of cells selected is shown in the figure legend of each plot (Figure 8).

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To filter the high-quality cells, click the  icon in the Filtering card in the top right, and click Apply observation filter... (Figure 9).

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Select the input data node for the filtering task and click Select (Figure 10).

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