Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

If you are installing Partek Flow on your own single-node server, we require the following for successful installation:

  • Linux: Ubuntu® 12 16.041, Redhat® 61 7 or later, CentOS® 6, or CentOS® 7 7 or later2
  • 64-bit 2GHz quad-core processor23
  • 48GB of RAM34
  • 1TB of storage available for data
  • /opt – 100GB of storage available for installation
  • A broadband internet connection

We support Docker-based installations. Please contact support@partek.com for more information. 

1We Highly recommend using Redhat® 7 since 6 has been  in "Product retirement" since May 20172Recent versions of Ubuntu ship with incompatible packages. Until we have resolved this, deploy Flow with Ubuntu 16.04 LTS.

2We highly recommend using the latest versions of Redhat® or CentOS®

3Note that some analyses have higher system requirements for example to run the STAR aligner on a reference genome of size ~3 GB (such as human, mouse or rat), 16 cores are required.

34Input sample file size can also impact memory usage, which is particularly the case for TopHat alignments. 

...