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unizp -d ~/.partekflow/ python-dependencies.zip

Variant Effect Predictor

This is a compiled Perl script (so it has no direct dependency on Perl itself) we have had one report (istem.fr) of it failing to run. 

R

R can usually be installed from the package manager.  If the user installs Flow via apt or yum it should already be installed.

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packageVersion("packageName")

R_HOME=/path/to/R

Variant Effect Predictor

This is a compiled Perl script (so it has no direct dependency on Perl itself) we have had one report (istem.fr) of it failing to run. 

DECoN

DECoN comes pre-installed in the flow_dna container

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