Genomics Suite Documentation

PGS Documentation

Page tree

Versions Compared

Old Version 15

changes.mady.by.user Paul Fullerton

Saved on

compared with

New Version 16

changes.mady.by.user Paul Fullerton

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Sample IDGroup Name
GSM2515899_200526580002_R01C01Primed + shCTRL
GSM2515900_200526580002_R02C01Primed + shCTRL
GSM2515901_200526580002_R03C01Naive + shCTRL
GSM2515902_200526580002_R04C01Naive + shCTRL
GSM2515903_200526580002_R05C01Naive + shPOU5F1
GSM2515904_200526580002_R06C01Naive + shPOU5F1
GSM2515905_200526580002_R07C01Naive + shNANOG
GSM2515906_200526580002_R08C01Naive + shNANOG

There should now be four groups with two samples in each group (Figure 43).

 

Numbered figure captions
SubtitleTextAdding State attribute as a categorical group
AnchorNameState attribute

Image AddedImage Modified

  • Select OK
  • Select No from the Add another categorical attribute dialog
  • Select Yes to save the spreadsheet

A new column s has been added to spreadsheet 1 (Differential Methylation Analysis) with the state and shRNA treatment experimental group of each sample (Figure 64). 

 

Numbered figure captions
SubtitleTextAdded experimental group as a sample attribute
AnchorNameSpreadsheet with added attribute

Image RemovedImage Added

 

 

Page Turner
button-linkstrue

...