Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Numbered figure captions
SubtitleTextSample histogram. Mousing over shows detailed information about the interval. This includes sample name, range and frequency of the selected sample.
AnchorNamesample-histogram

References

 

  1. Bolstad BM, Irizarry RA, Astrand M, Speed, TP. A Comparison of Normalization Methods for High Density Oligonucleotide Array Data Based on Bias and Variance. Bioinformatics. 2003; 19(2): 185-193.

 

 

2. Mortazavi A, Williams BA, McCue K, Schaeffer L, Wold B. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods. 2008; 5(7): 621–628.

 

3. Bullard JH, Purdom E, Hansen KD, Dudoit S. Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments. BMC Bioinformatics. 2010; 11: 94.

4. Robinson MD, Oshlack A. A scaling normalization method for differential expression analysis of RNA-seq data. Genome Biol. 2010; 11: R25.

5. Dillies MA, Rau A, Aubert J et al. A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis. Brief Bioinform. 2013; 14(6): 671-83.

6. Wagner GP, Kin K, Lynch VJ. Measurement of mRNA abundance using RNA-seq data. Theory Biosci. 2012; 131(4): 281-5.

7. Ritchie ME, Phipson B, Wu D et al. Limma powers differential expression analyses for RNA-sequencing and microarray studies. Nucleic Acids Res. 2015; 43(15):e97.

 

Additional assistance

 

Rate Macro
allowUsersfalse