Partek Flow Documentation

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Because of the large size of single cell RNA-Seq data sets and the computationally-intensive tools used in single cell analysis, we have amended our system requirements and recommendations for installations of Partek® Flow® of Partek Flow with the Single Cell toolkit. 

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More than 100,000 cells per analysis

Required

  • Linux: Ubuntu® 16 18.04, Redhat® 7.6 8, CentOS® 7.6 8, or newer

  • CPU: 64-bit 2 GHz quad-core processor

  • Memory: 256 GB of RAM

  • Local scratch space1: 2 TB with cached or native speeds of 2GB/s or higher

  • Storage:  > 4 TB available for data

Recommended

  • Linux: Ubuntu® 16 18.04, Redhat® 7.6 8, CentOS® 7.6 8, or newer

  • CPU: 64-bit 2 GHz quad-core processor

  • Memory: 512 GB of RAM

  • Local scratch space1: 10 TB with cached or native speeds of 2GB/s or higher

  • Storage: 10 TB available for data

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