Partek Flow Documentation

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For more details on adding Prep kits, please see our documentation on Trim Tagstags. The prep kit should include cell barcode and unique molecular identifiers (UMIs) locations. 

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This tab-delimited text file should have the feature ID in the first column and the nucleotide sequence in the second column.  Do not include column headers.  

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The output of Count feature barcodes is a Single cell counts data node. 

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Count feature barcodes uses a series of tasks available independently in Partek Flow to process the input FASTQ files. The output files generated by these tasks are not retained in the Count feature barcodes output. 

Trim Tagstags identifies the UMI and cell barcode sequences. The Prep kit is specified using the Prep kit setting.  

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