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ThePathway-Enrichment spreadsheet will be added to the spreadsheet tree in Partek Genomics Suite and the Partek® Pathway software will open to provide visualization of the most significantly enriched pathway as a pathway diagram (Figure 5). The color of the gene boxes reflects p-values of the associated differentially methylated CpG loci (bright orange is insignificant, blue is highly significant). The Color by option can be changed another column from the gene-list.txt spreadsheet., such as Difference Difference. 

 

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SubtitleText: Partek Pathway illustrating one of the pathways overrepresented in the list of genes overlapping the differentially methylated CpG sites.
AnchorNamePathway Diagram

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