Partek Flow Documentation

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SubtitleTextSelecting a cell annotation file
AnchorNamePicking a file

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To view a preview of the files, click Show Preview (Figure 2). 

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SubtitleTextAnnotation files should have cells on rows and cell attributes on columns
AnchorNamePreviewing the annotation file

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If you would like to annotate your matrix features with a gene annotation file, you can choose an annotation file at the bottom on the dialog. You can choose any gene/feature annotation available on the Partek Flow server. If a feature annotation is selected, the percentage of mitochondrial reads will be calculated using the selected annotation file. 

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SubtitleTextPreviewing attributes to import
AnchorNamePreviewing cell attributes

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You can choose which attributes to import using the check-boxes, change the names of attributes using the text fields, and indicate whether an attribute with numbers is categorical or numeric. 

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SubtitleTextOutput of annotate cells
AnchorNameOutput of annotate cells

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You annotations will be available in downstream analysis tasks. 

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