Partek Flow Documentation

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excludeAdditional Assistance

To compare gene expression for malignant cells between astrocytoma and oligodendroglioma subtypes, malignant cells from each sample can be pooled to simulate bulk RNA-Seq data. 

Pool cells

Use Principle Components Analysis (PCA) to reduce dimensions

  • Click the Filtered counts data node 
  • Expand the Pre-analysis tools section of the task menu
  • Click Pool cells (Figure 1)

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