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Partek Flow Documentation

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On the Analysis tab, selecting a data node containing aligned reads, variants, gene or transcript counts, or feature lists, shows Chromosome view in the Visualization section of the context-sensitive menu (Figure 1). 


If Partek® Flow® Flow has  has no information on the genome build, you will need to provide the species and genome build in a subsequent dialog (not shown). Otherwise, chromosome view will come up directly. 

Numbered figure captions
SubtitleTextAccessing Chromosome view via the context-sensitive menu (the content of the Visualisation section depends on the selected data node)
AnchorNameVisualization

A new Chromosome view task node will be added to the canvas (Figure 2) and in order to invoke the viewer <double-click> on the node (you can also select it and then go to Task report in the menu). When invoked in this way, the default visualization in the Chromosome view is the first 100,000 bases of the first chromosome.

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