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Figure 1. Accessing Chromosome view via the context-sensitive menu (the content of the Visualisation section depends on the selected data node)
The Chromosome view can be invoked from some data nodes on the Analysis tab, giving a global overview of the results; or from certain Task report or result pages, providing a focused view, i.e. pointing to a specific feature of interest.
Running a Chromosome View Task from a Data Node
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A new Chromosome view task node will be added to the canvas (Figure 2) and in order to invoke the viewer <double-click> on the node (you can also select it and then go to Task report in the menu). When invoked in the aforementioned way, the default visualization in the Chromosome view is the first 100,000 bases of the first chromosome.
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Browsing directly to a location directly from a Task Report
Another way to get the Chromosome view is through a Task report. YYou can launch the viewer by selecting the chromosome icon in the View column (Figure 3) of GSA or View Variants report.
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Overview
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