Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

The List management page allows users to create, view, and edit lists within a Partek® Flow® instance. To access the List management page, select the user avatar in the top right corner of the Partek Flow interface, select Settings from the pop-up menu, then select List Management from the panel on the left in the Partek Flow components section.  The List management page can be accessed by administrative and non-administrative users (Figure 1). 

 


Numbered figure captions
SubtitleTextList Management
AnchorNamelmg page

Image RemovedImage Added

For each list, you can view the name of the list, description, feature count, creatornumber of features, owner, and options to download (), edit the name or description of the list (), share (Image Added) or delete the list (). 

Create a new list

...

  • Local file: has to be text file on the local computer
  • Text: manually specify a list of names
  • Hosted lists: lists hosted on Partek website,

 


When manually specify a file or a list of names to add list, only the user who added the list can view and use the lists. When lists downloaded from the hosted website, the lists can be viewed and used by all the users on the server.

List name has to be unique for each user. The description field is optional. The list of features can be specified from a .txt file by selecting the From file option (Figure 2). For this option, you can choose a .txt file from your local computer. The .txt file should contain only one column - a list of feature names. 

 


Numbered figure captions
SubtitleTextAdding a list from a .txt file
AnchorNameAdding List from File

Image RemovedImage Added

To manually enter a list of genes, select the Text option (Figure 3). Content can be typed into the text field or pasted from the clipboard.

 


Numbered figure captions
SubtitleTextType or paste feature names in the text field
AnchorNamelist_text

Image RemovedImage Added

Select Save Add list to add the list. The new list will be added to the list table with its name, description, number of features in the list, and creator information. The list can be downloaded as text file (), edit the name and description (), and deleted ().

When choose Hosted lists option, lists can be downloaded from Partek website (Figure 4)

Numbered figure captions
SubtitleTextDownload list from Partek website
AnchorNamehostlist

Image Added

Click on the check button on the left of the table to select lists and click Add list. The downloaded lists are automatically shared with all users on the server. If you don't want to see the list, check Ignore button on the lists shared with you, you will not see the ignored lists when you perform a task related to list, like filter feature task etc.

Once a list is added to the Flow server, it can be used to filter data, e.g. to filter RNA-seq quantification data to only include or exclude the genes in a list. 


Additional assistance

 

Rate Macro
allowUsersfalse

...