Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

The report produced by DESeq2 is similar to the ANOVA report; each row is a feature and columns include p-value, FDR p-value and fold change in linear scale for each contrast. However DESeq2(R) report doesn't have LSMeans information on the compared groups.

References

Love MI, Huber W, and Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biology 2014l 15(12): 550.

...