Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

By default, only features (e.g., genes) with one or more aligned read will be included in the output. If this option is selected, all features from the annotation model, including those without any matching aligned reads, will be included.

Advanced Options

 

Numbered figure captions
SubtitleTextAdvanced options for HTSeq
AnchorNameHTSeq advanced options

Image Added

Min qual

HTSeq will skip reads with an alignment quality lower than the value specified here. The default is 10.

...