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Partek Flow Documentation

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  • Linux: Ubuntu® 12.04, Redhat® 61, CentOS® 6, or newer
  • Mac: OS X Yosemite 10.10 or newer
  • 64-bit 2GHz quad-core processor12
  • 48GB of RAM23
  • 1TB of storage available for data
  • /opt – 100GB of storage available for installation

  • A broadband internet connection

1We Highly recommend using Redhat® 7 since 6 has been  in "Product retirement" since May 2017

2Note that some analyses have higher system requirements for example to run the STAR aligner on a reference genome of size ~3 GB (such as human, mouse or rat), 16 cores are required.

23Input sample file size can also impact memory usage, which is particularly the case for TopHat alignments. For using our Single Cell Toolkit, analysis of multiple samples with over 5000 cells per sample will require at least 64 GB of memory.

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