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The tutorial data set will be downloaded onto your Partek Flow server and a new project, Glioma (multi-sample), will be created. You will be directed to the Data tab the Data tab of the new project. Because this is a tutorial project, there is no need to click on Import data, as the import is handled automatically (Figure 3). 

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An important step in analyzing single cell RNA-Seq data is to filer out low quality cells. These include doublets and Low quality cells can be doublets, cells damaged during cell isolation, and cells with too few reads to be analyzed. 

• Click on QA/QC section of the task menu
• Click on Single cell QA/QC (Figure 10)
  
  

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