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Because Pooled counts data is virtual bulk RNA-Seq data, all the same tasks that can be performed on bulk RNA-Seq gene counts data in Partek Flow can be performed on Pooled counts data. 

Running the Pool cells task

Before running Pool cells, you must classify the cells. To run Pool cells, select the data node with your classified cells and select Pool cells from the QA/QC section of the task menu (Figure 1).

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