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DESeq2 dialog is very similar to ANOVA dialog, both categorical and numeric attributes can be added into the model. Interaction terms can also be added to the model, however, in order to perform contrast of the interaction term, a new attribute that combines the factors of interest should be added, and the contrast can be performed on the new combined attribute ( http://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#interactions)
DESeq2 report
The report of DESeq is similar to ANOVA report, each row is a feature, each contrast reports p-value, FDR p-value and fold change in linear scale.
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