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PGS Documentation
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Partek Genomics Suite Documentation
Tutorials
Differential Methylation Analysis
Page Information
Title:
Differential Methylation Analysis
Author:
Ivan Lukic
May 12, 2017
Last Changed by:
Paul Fullerton
Sep 25, 2017
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https://documentation.partek.com/x/gQCd
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Genomics Suite Documentation (1)
Home page:
Partek Genomics Suite Documentation
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Tutorials
Children (13)
Page:
Import and normalize methylation data
Page:
Annotate samples
Page:
Perform data quality analysis and quality control
Page:
Detect differentially methylated loci
Page:
Create a marker list
Page:
Filter loci with the interactive filter
Page:
Obtain methylation signatures
Page:
Visualize methylation at each locus
Page:
Perform gene set and pathway analysis
Page:
Detect differentially methylated CpG islands
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Page:
Optional: Add UCSC CpG island annotations
Page:
Optional: Use MethylationEPIC for CNV analysis
Page:
Optional: Import a Partek Project from Genome Studio
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Recent Changes
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Sep 25, 2017 16:42
Paul Fullerton
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Sep 18, 2017 09:10
Paul Fullerton
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Jul 10, 2017 11:29
Paul Fullerton
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Jul 10, 2017 11:21
Paul Fullerton
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Jul 10, 2017 11:21
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s3.amazonaws.com/partekmedia/tutorials/microarray/Different…
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE93373
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