One of the main functions of GO enrichment is to find the overrepresentation of functional categories in a gene list.
- From the Gene Expression workflow, select Biological Interpretation followed by Gene SetAnalysis
- Choose the GO Enrichment radio button in the Gene Set Analysis dialog (Figure 1) followed by Next
- Make sure the Gene_List.txt spreadsheet is selected from the dropdown list and click Next
You have the choice to use the Fisher's Exact or Chi-Square test. You can also restrict the analysis to functional groups with more than or fewer than a specified number of genes.
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