Differential expression analysis can be used to compare the classification (FASN expression) we previously made based on expression levels of the FASN gene. Here, we will compare FASN high and FASN low cells to identify genes.
Differential analysis
- Choose Differential analysis from the Statistics drop-down in the task menu
Compute biomarkers
- Select the Normalized counts node and choose Compute biomarkers from the Statistics drop-down
- Choose the "FASN expression" attribute
- Do not select Split by sample
- Click Finish
This results in a Biomarkers report.
- Double-click the Biomarkers results node to open the report
The top features are reported for the comparison.
- Download this table with more than 10 features using the Download option
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