Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

How can I add transgenes to my reference files? 

How do I classify the cells?

Statistics FAQs

Why do I get "?" for FDR p-values in my Deseq2 result?

...

In Partek Flow, GSEA should be performed on a sample/cell and feature matrix data node, e.g. normalization count data. GSEA is used to detect a gene set/a pathway which is significantly different between two groups. Gene set enrichment should be performed on a filtered gene list; it is used to identify overrepresented gene set/pathway based the filtered gene list using Fisher's exact test. The input data is a filtered list using gene names.

How do I classify the cells?