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Result of running Trajectory analysis in Partek Flow is the Trajectory result data node. Double clicking on the node opens a Data Viewer window with the trajectory plot (Figure xxx). Cell trajectory graph . Blue dots are individual cells (total count is displayed in the upper right). Black line represents the structure of the trajectory graphshows position of each cell (blue dot) with respect to the UMAP coordinates (axes). Cell trajectories (one or more, depending on the data set) are depicted as black lines. Gray circles are trajectory nodes or leaves. The axes represent UMAP coordinates.(i.e. cell communities).
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SubtitleText | Cell trajectory graph. Blue dots are individual cells (total count is displayed in the upper right). Black line represents the structure of the trajectory graph. Gray circles are nodes or leaves. The axes represent UMAP coordinates. |
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AnchorName | 3D trajectory plot |
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To show / hide cell trajectory tree and trajectory nodes, use the Extra data option on the Content card (Figure xxx).
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SubtitleText | Extra data card enables the user to turn the trajectory tree and the trajectory nodes on or off |
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AnchorName | trajectory tree node |
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