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Flow Documentation

Partek Flow Documentation

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changes.mady.by.user Ivan Lukic

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  • Min trimmed read length: 8
  • Mask short adapter reads: 8
  • Use basis mask: Y26, I8, Y98 (the screenshot is Chromium Single cell 3' v2 prep kit. The settings for Chromium Single cell 3' v3 is Y28,I8,Y91)
  • Create fastq for index reads: ON Off
  • Ignore missing bcls: ON
  • Ignore missing filter: ON
  • Ignore missing positions: ON
  • Ignore missing controls: ON

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Numbered figure captions
SubtitleTextSetting the advanced options to import bcl files
AnchorNameadvanced bcl options

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Click Apply to accept and then Finish to import your files.

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