Partek Flow Documentation

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ChIP-Seq and ATAC-Seq identify enriched regions or peaks in genome. Depending on the assay, the biological meaning of enrichment changes; in ChIP-Seq, enrichment indicates protein binding, while in ATAC-Seq, enrichment indicates open chromatin. To understand the importance of these enriched regions for in regulating gene expression, we can add information about overlapping or nearby genomic features. 

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