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- Click the counts data node
- Click the Exploratory analysis section of the toolbox
- Click Graph-based clustering
- Configure the parameters
- Click Finish to run
Graph-based clustering produces a Clustering result data node. The task report lists the cluster results and cluster statistics (Figure 1). If clustering was run with Split cells by sample enabled on a single cell counts data node, the cluster results table displays the number of clusters found for each sample and clicking the sample name opens the sample-level report.
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