Partek Flow Documentation

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SubtitleTextUMAP calculated on Gene Expression values. Colored by Graph-based clustering results.
AnchorNameUMAP results

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Plot controls are located in the control panel on the left. You can adjust plot options, perform selection and filtering, and manage cell type classifications using the control panel. Below the scatter plot is a biomarker table giving the top genes and proteins that are highly and specifically expressed in each cluster. Although the clusters were identified using only the gene expression data, the biomarkers calculation includes genes and proteins. The table is interactive and clicking a feature (gene or protein) in the table will color the plot by that feature (hold Ctrl on your keyboard and click to color by multiple genes in the table). 

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