Join us for a webinar: The complexities of spatial multiomics unraveled
May 2

Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Numbered figure captions
SubtitleTextNoise reduction filter
AnchorNameNoise reduction filter

Image RemovedImage Added

 Descriptive statistics you can choose are:

...

Numbered figure captions
SubtitleTextSelecting value exposes additional options
AnchorNameFiltering by value

Image RemovedImage Added

Statistics based filter

...

Numbered figure captions
SubtitleTextStatistics based filter
AnchorNameStatistics based filter

Image RemovedImage Added

Select Counts to specify a number of top features to include or select Percentiles to specify the top percentile of features to include. 

...

Numbered figure captions
SubtitleTextFilter features based on feature annotation fields
AnchorNamefilter meta
Image RemovedImage Added

You can specify logical operation using different annotation field information.

...

Numbered figure captions
SubtitleTextFeature list filter
AnchorNameFiltering by a list

Image RemovedImage Added

If you have added feature lists in Partek Flow using the List management feature, the filter using Saved list option will be available. Otherwise, you can specify Manual list by typing in the Filter criteria box.

...

You can choose to include or exclude features in any list that you have added. 

Use the Feature identifier option to choose which identifier from your annotation matches the values in the feature list. 

...

Numbered figure captions
SubtitleTextFeature filter report table
AnchorNameFeature filter report

Image RemovedImage Added

If the input was a count matrix data node, sample box plot and sample histograms are provided to show the distribution of features after filtering. These plots are not available if the input was a single cell counts data node. 

...

Numbered figure captions
SubtitleTextFilter features report figures
AnchorNameFilter features report

Image RemovedImage Added



Additional assistance


...