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Partek Flow Documentation

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  • Click  to view the Volcano plot 
  • In the Configuration card on the left, expand the Size card and increase the point size to 6
  • In the Configuration card on the left, expand the Data card and change the Y-axis to FDR step up (Glioma vs Oligodendrocytes)
  • In the Configuration card on the left, expand the Significance card and change X threshold to -10 and 10 and the Y threshold to 0.001 
  • In the Selection card on the right, set the Fold change thresholds to -10 and 10
  • In the Selection card on the right, click  to remove the P-value (Glioma vs Oligodendrocytes) selection rule. From the drop-down list, add FDR step up (Glioma vs Oligodendrocytes) as a selection rule and set the maximum to 0.001

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