This tutorial will will illustrate:

Note: the workflow described below is enabled in Partek^® Genomics Suite^® version 7.0. Please contact the Partek Licensing Team at licensing@partek.com to request this version or update the software release via Help > Check for Updates on the main menu toolbar within Partek Genomics Suite. The screenshots shown below may vary across platforms and across different versions of Partek Genomics Suite.

Description of the Data Set

The data for this tutorial is taken from an experiment that examined the effects of four treatment conditions at two time points on estrogen receptor-positive breast cancer cell lines in vitro. Each treatment/time combination has two replicates and there are two control samples for a total of eighteen samples. Gene expression analysis was performed using the Affymetrix GeneChip^® Human U95A array. Values are transformed to log base 2 scale by f(x) = log₂(x+1). 

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