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- Configure the dialog as shown (Figure 3)
Output
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file provides a name for the top-level spreadsheet. Browse can be used to change the output directory.
- Select Homo sapiens from the Species drop-down menu to allow us to menu
This will allow us to select a human genome reference assembly alignment.
- Select hg19 for Genome/Transcriptome reference used to align the reads. reads
This is the reference genome our tutorial data was aligned to using Partek Flow.
- Select OK to open the BAM Sample Manager dialog (Figure 4)
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