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This section provides additional tools that may be useful for system administrators who maintain the the Partek® Flow® server.
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At anytime, you wish to know the status of Partek Flow:
$ service partekflowd status
Possible outputs are RUNNING or STOPPED.
To find out the current Flow installation path, run:
Locating the
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log files
- The
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- Partek Flow server log is contained in the file
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- /opt/partek_flow/logs/catalina.out
In some cases, it may be necessary to run $ ps aux | grep flow to determine the current Partek Flow installation path. That should lead us to the most recent catalina.out file.
- To zip all the logs of Partek Flow (server and task logs)
- zip /opt/partek_flow/logs/
- zip /home/flow/.partekflow/logs (or the whole .partekflow folder that has the database)
Changing the Temporary Folder Location
By default, temporary files resulting from genomic data uploads to Flow are stored in /opt/partek_flow/temp and are removed upon upload completion. If Flow is installed on a small root partition (<20GB), exceedingly large uploads may fill the root partition and necessitate moving this temporary directory to a larger partition. In order to select a new Flow temp folder, complete the following logged in as root:
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- Install Partek Flow as described earlier in this document.
When prompted for license, paste the license generated for the new machine. - Shutdown Partek Flow to install previous database:
$ sudo service partekflowd stop - Unpack partekflowdb.bkup.tgz:
$ sudo su - flow
$ tar -xzvf partekflowdb.bkup.tgz
$ exit Restart Partek Flow
$ sudo service partekflowd start
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